Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015879256.1_cds_XP_016437067.1_32860
CDS Infomation

[gene=LOC107763137] [db_xref=GeneID:107763137] [protein=BTB/POZ domain-containing protein At3g44820-like] [protein_id=XP_016437067.1] [location=complement(join(16048..16614,17077..18288,20093..20162,20917..20966))] [gbkey=CDS]
Sequence

ATGGCACCTGCTGGGAAGGTTACTGGGTTCTGCCGTGAGGGAAATGACTGGTTTTGCAAT
GCAAGTTTGGTCAGTGATGTTACCTTGGTAGTGGATGGAGTAAACTTCCACCTTCACAAG
TTTCCACTTATGTCAAGATGTGGGAGGATTGCCAAAATACTAGAAGCAGCTCAAGGTCCG
CATGAAGGGAATTTGCTGATAACTTTGGAAGACTTCCCTGGTGGGAGTGACAGATTTCTG
GTCGCAGTTAAATTCTGCTACAGTATTCGAGTAGATCATACCCCGAGGAACATTGTAATG
ATTTATTGTGCAGCAGACTACTTGGAGATGACGGAGGAGTATGGAGAAGATAATTTACTG
TTGAAGGCAGATGCTTACTTTCATAAGAATACTATTAGGAATTGGAAAGATTGCATATTG
GCTCTCCAAACTTGTGATCCTGTCATTCCAAAAGCAGATAAGCTAGAGATCATTAGTAAA
TGCTTGAATGCGCTCTCTGTGATGGTCTGCACAGATCCTAGTTTATTTGGATGGCCTATG
TTGATGTATGGCAGCTTACAGAGCCCTGGAGGTAGTATATTGTGGAATGGAATTAACACT
GGTGCTAGAATCCAAACCATTGAATCTGACTGGTGGTTCGAAGACATCTCATATCTTTCT
GTACCATTATTTCAGAGACTAATTCAAACAATGGAAGCCAGAGGTATTAGACATGAAAAT
TTAGCAGGTGCTATGATGTACTACTGTAGAAAGTACCTTCCAGGACTTGGCCGGTGGCAG
AGTGGGCAAAGTGGTAAAACTAGAACAGTTGCTAGTTTTAGTATGACACCCGCTGCCGTT
GATCAGAAAGTTCTCCTAGAAAGTGTTGTGAAACTGCTTCCAGAATTGAAGGGAAAATCT
TTTTGCCGTTTCTTGTTGGGACTTCTGCGAGTTGCGTTGATTCTTGGTGTGAACCACACA
TGCCAGGACTCGCTGGAGAGGAGAATAGGAATGCAATTGGACCTAGCATCCCTTGATGGT
TTGCTGATACCTTCCTACTCAGATTCTGATACATTATATCACACTGATTGTGTTGAACGA
ATGATTCATCATTTTATATCTTCTGAACCTGGGATCGCCACAACACCTGCTCCATCTTCA
TTTGAGATAAGAACATCACCATCATCTGACCCTTTAAGGAGAGTGGCGAAGCTGGTAGAC
AGCTATATTGCAGAAGTTGCATCTGATGTGAACCTAAAGCCTGGAAAAATTCGTTCACTT
GCTGAAGCTCTCCCAGAATCTTCAAGATCTCTGCATGATGGGCTATACAGAGCTATAGAT
ATATACTTTAAGGCGCATCCTTGGCTCTCAGATAAAGAAAAGGAGCAGCTTTGCAACATA
ATCGACTTTCAGAAGCTCTCTATTGATGCTTGTGCACATGCATCCCAGAATGACAGGTTG
CCTCTTCGAGTAGTTCTCCAAGTCCTGTTCTTCGAGCAATTGCAGCTGAGAACAGCTCTA
GCTGGCTGTCTCCATGTCTTGGACACAGAAAGTGCCCCTGCAGCTCCTGTCACTGTCACT
GGCCCCACTGACATGGCAGGTCAAATTGTACAGAGAGATGGATGGGTCACAGTCGTGCGT
GAGAACCAGGGTCTAAAGGTGGACTTAGAAAGGATGAAGTCCAGGGTTGGTGAACTTGAA
GAAGAATTCAGCAAAATCAAACAAGAGATGAGAAAGGTCACAAAGTCGCACAGTTACCTC
AGTTCCCCGCGCTTTCTTGCCCGAAAGATTGGATGCAAGCTGCTTCCCCAATCGTCAGAC
ACTCAAGCAGACGTGGTTGAAAGCACAGGTCCAACCCCAAGATCATCCATAGAGCAACCG
AGAAGCTCAAGACACCGTAAAAGTTCCTCTTTGTTTTGA

Peptide Sequence

PEP ID

XP_016437067.1
PEP Infomation

PREDICTED: BTB/POZ domain-containing protein At3g44820-like [Nicotiana tabacum]
Sequence

MAPAGKVTGFCREGNDWFCNASLVSDVTLVVDGVNFHLHKFPLMSRCGRIAKILEAAQGP
HEGNLLITLEDFPGGSDRFLVAVKFCYSIRVDHTPRNIVMIYCAADYLEMTEEYGEDNLL
LKADAYFHKNTIRNWKDCILALQTCDPVIPKADKLEIISKCLNALSVMVCTDPSLFGWPM
LMYGSLQSPGGSILWNGINTGARIQTIESDWWFEDISYLSVPLFQRLIQTMEARGIRHEN
LAGAMMYYCRKYLPGLGRWQSGQSGKTRTVASFSMTPAAVDQKVLLESVVKLLPELKGKS
FCRFLLGLLRVALILGVNHTCQDSLERRIGMQLDLASLDGLLIPSYSDSDTLYHTDCVER
MIHHFISSEPGIATTPAPSSFEIRTSPSSDPLRRVAKLVDSYIAEVASDVNLKPGKIRSL
AEALPESSRSLHDGLYRAIDIYFKAHPWLSDKEKEQLCNIIDFQKLSIDACAHASQNDRL
PLRVVLQVLFFEQLQLRTALAGCLHVLDTESAPAAPVTVTGPTDMAGQIVQRDGWVTVVR
ENQGLKVDLERMKSRVGELEEEFSKIKQEMRKVTKSHSYLSSPRFLARKIGCKLLPQSSD
TQADVVESTGPTPRSSIEQPRSSRHRKSSSLF

Transcript Sequence

Gene sequence data has not been registered.